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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931718.1_cds_XP_016478445.1_70084
CDS Infomation

[gene=LOC107799812] [db_xref=GeneID:107799812] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g63430] [protein_id=XP_016478445.1] [location=join(5953..6040,6273..6411,6756..6827,6910..7053,7155..7304,7586..7702,7889..7953,8181..8432,8537..8742,8826..8958,9036..9193,9369..9584,9670..9915)] [gbkey=CDS]
Sequence

ATGAGAACTTTTGCTTTCTTATCAGTTTTAACAGTGTTCTTGAGTGTTGAGAGAATTATG
ATCTGTGATGCTTTTCCATCACATGAAGTTTATGCTCTCAATACATTCAAGGAAGCTATA
TATGAAGACCCTCTTCTGGTTTTGTCAAATTGGAATGCCTTAGATTCAGATCCTTGTGAT
TGGGCTGGAATCTTTTGTTCTATGGCTCAAGATCATGTCATAAAAATTAACATTTCTGGT
GCTTCATTGAAGGGTTTTCTTTCACCCAACTTGCATCAGCTCGCTTCTTTGCAAGAACTA
ATTTTGCATGGAAATGTACTGATTGGTACAATACCTAAGGAGATTGGCTTGTTGAAAAAC
CTAAAGGTCTTGGATTTGGGTGCTAACCAGCTAACAGGACCAATTCCTCGTGAGCTTGGC
AATCTGACAAACCTTATGAAAATAAACCTACAATCCAATGGATTAACAGGAAAATTGCCT
GCTGAGCTTGGTAATTTGAAATACCTTGAGGAACTTCGGCTGGACAGGAACAAACTTCAA
GGAACAGTGCCCGCTAATAATGGATCAGATTTTACATCCGGTGTACATGGAATGTATGCT
TCTGGTGCCAGCCCTACTGGATTTTGTCGTTCATCCCAACTTAAAGTTGCTGATTTCTCA
TTCAACTTTCTCATCGGAAGCATACCAAAGTGCTTGGGTTACCTTCCAAAATCTAGCTTT
CAAGGAAATTGCCTTCAGCATAAAGATCCAAAGCAGCGCTCTGCTTCTCTATGTGGTGGC
ACTCCACCTCCCACTAGCCATGCGTCAACAGTCAATACTAAGCACCCTTCTGTTGAAGGA
CCGAGACATCAGGCTTCTTCTTCCAAGCCCACCTGGCTTTTGGCTTTAGAAGTGGTAACG
GGAGTTATGGTTGGTTCTCTCTTCATCGTGGCTCTTGTGACTGGCCTTCACAAGTGTAAG
AACAAATCCTCTATCATACCTTGGAAAAAATCAGGAAGCGGGAAAGATAATATGACCATT
TACGTAGATACTAGTATGCTGAAAGATGTCGTAAGATACAGCAGACAAGAACTTGAGGTA
GCTTGTGAGGATTTCAGCAACATCATTGGATCCTCGCCAGACAGCTTAGTTTACAAAGGA
ACCATGAAAGGTGGACCCGAGATAGCTGTAATATCGCTTTGTGTCAAAGAAGAGCATTGG
ACAGCCTATCTAGAGCTTTATTTTCAGAAAGAGGTGGCAGAATTGGCCAGAATAAATCAC
GAGAACACTGGGAAACTTCTAGGCTATTGCAGAGAGAGTAGTCCTTTCACGAGGATGTTG
GTGTTTGAGTATGCATCCAATGGGACATTATACGAACACCTTCACTACGGAGAAGGATGC
AACCTATCTTGGACACGCCGGATGAAAATAGTTATTGGTATCGCTAAGGGACTGACATAT
CTACATTCAGAACTTGACCCTCCATTTACTATATCAGAACTGAACTCAAATTCTATATAT
CTCACAGAAGATTTTTCTCCAAAGCTTGTTGATTTTGAAAGTTGGAAGTCAATAATTTCA
AGATCAGAAAAGAACTCGGGTGCTATCAGTAGTGAAGGAGCAATATGTGTCCTTCCAAAT
ACTCTAGAGGGCCGTCATCTCGACGTCCAGGGTAATACTTATGCATTTGGAGTACTGCTA
CTGGAAATAATCAGTGGGAGACCTCCATATTGCAAAGACAAAGGGTGCTTAGTAGATTGG
GCTAAGGAATTTCTTGAAGTACCAGAGGTATTATCCTATGTTGTAGATCCCGAGTTGAAA
CATTTCAAACAAGAAGACCTCAAAGTGATTTGTGAGGTGATTAACCTTTGTATCCACCCG
AGTTCGAGCAGGAGGACTTCCATGAAGGACTTGTGTGCTATGTTAGAGAGCAACATTGAC
ACTTCAATCACTGCAGAGCTCAAGGCATCTTCTTTGGCGTGGGCCGAGCTTGCACTTTCA
TCCTAA

Peptide Sequence

PEP ID

XP_016478445.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 [Nicotiana tabacum]
Sequence

MRTFAFLSVLTVFLSVERIMICDAFPSHEVYALNTFKEAIYEDPLLVLSNWNALDSDPCD
WAGIFCSMAQDHVIKINISGASLKGFLSPNLHQLASLQELILHGNVLIGTIPKEIGLLKN
LKVLDLGANQLTGPIPRELGNLTNLMKINLQSNGLTGKLPAELGNLKYLEELRLDRNKLQ
GTVPANNGSDFTSGVHGMYASGASPTGFCRSSQLKVADFSFNFLIGSIPKCLGYLPKSSF
QGNCLQHKDPKQRSASLCGGTPPPTSHASTVNTKHPSVEGPRHQASSSKPTWLLALEVVT
GVMVGSLFIVALVTGLHKCKNKSSIIPWKKSGSGKDNMTIYVDTSMLKDVVRYSRQELEV
ACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCVKEEHWTAYLELYFQKEVAELARINH
ENTGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHYGEGCNLSWTRRMKIVIGIAKGLTY
LHSELDPPFTISELNSNSIYLTEDFSPKLVDFESWKSIISRSEKNSGAISSEGAICVLPN
TLEGRHLDVQGNTYAFGVLLLEIISGRPPYCKDKGCLVDWAKEFLEVPEVLSYVVDPELK
HFKQEDLKVICEVINLCIHPSSSRRTSMKDLCAMLESNIDTSITAELKASSLAWAELALS
S

Transcript Sequence

Gene sequence data has not been registered.